2019

  • Arab, M. M., Marrano, A., Abdollahi-Arpanahi, R., Leslie, C. A., Cheng, H., Neale, D. B., & Vahdati, K. (2019). Combining phenotype, genotype and environment to uncover genetic components underlying water use efficiency in Persian walnut. Journal of experimental botany. Abstract.
  • Arab, M.M., Marrano, A., Abdollahi-Arpanahi, R., Leslie, C.A., Hossein, A., Neale, D.B., Vahdati, K. (2019). Genome-wide patterns of population structure and association mapping of nut-related traits in Persian walnut populations from Iran using the Axiom J. regia 700K SNP array. Scientific Reports, 9(1), 6376. Full Text.
  • De La Torre, A. R., Wilhite, B., & Neale, D. B. (2019). Environmental Genome-Wide Association Reveals Climate Adaptation Is Shaped by Subtle to Moderate Allele Frequency Shifts in Loblolly Pine. Genome biology and evolution11(10), 2976-2989. Full Text.
  • Durán, R., Rodriguez, V., Carrasco, A., Neale, D.B., Balocchi, C., Valenzuela, S.A. (2019) SNP discovery in radiata pine using a de novo transcriptome assembly. Trees. https://doi.org/10.1007/s00468-019-01875-w. Full Text.
  • Guerra, F.P., Suren, H., Holliday, J., Richards, J.H., Fiehn, O., Famula, R., Stanton, B.J., Shuren, R., Sykes, R., Davis, M.F., Neale, D.B. (2019) Exome resequencing and GWAS for growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa. BCM Genomics (In Press).
  • Linsmith, G., Rombauts, S., Montanari, S., Deng, C.H., Celton, J.M., Guérif, P., Liu, C., Lohaus, R., Zurn, J.D., Cestaro, A., Bassil, N.V., Bakker, L.V., Schijlen, E., Gardiner, S.E., Lespinasse, Y. Durel, C.E., Velasco, R., Neale, D.B., Chagné, D., Van de Peer, Y., Troggio,, Bianco, L. (2019). Pseudo-chromosome length genome assembly of a double haploid ‘Bartlett’ pear (Pyrus communis L.). bioRxiv, 651778. Full Text.
  • Marrano, A., Britton, M., Zaini, P.A., Zimin, A.V., Workman, R.E., Puiu, D., Bianco, L., Di Pierro, A.E., Allen, B.J., Chakraborty, S., Troggio, M., Leslie, C.A., Timp, W., Dandekar, A., Salzberg, S.L., Neale, D.B. (2019). High-quality chromosome-scale assembly of the walnut (Juglans regia L) reference genome. bioRxiv, 809798. Full Text.
  • Marrano, A., Martínez-García, P.J., Bianco, L., Sideli, G., Di Pierro, E., Leslie, C., Stevens, K., Crepeau, M., Troggio, M., Langley, C., Neale, D.B. (2019) A new genomic tool for walnut (Juglans regia L.): development and validation of the high-density AxiomTM J. regia 700K SNP genotyping array. Plant Biotechnology Journal, 17(6), 1027-1036. Full Text.
  • Marrano, A. and Neale, D.B. (2019). “Towards sustainable production of walnut (Juglans regia L.)” in Serdar, U., and Fulbright, D. (eds.) “Achieving sustainable cultivation of tree nuts.” Sawston, Cambridge: Burleigh Dodds Science Publishing Limited.
  • Marrano, A., Sideli, G. M., Leslie, C. A., Cheng, H., & Neale, D. B. (2019). Deciphering of the genetic control of phenology, yield and pellicle color in Persian walnut (Juglans regia L.). Frontiers in Plant Science10, 1140. Full Text.
  • Montanari, S., Bianco, L., Allen, B.J., Martínez-García, P.J., Bassil, N.V., Postman, J., Knäbel, M., Kitson, B., Deng, C.H., Chagné, D., Crepeau, M.W., Langley, C., Evans, K., Dhingra, A., Troggio, M., Neale, D.B. (2019) Development of a highly efficient Axiom™ 70K SNP Array for Pyrus and evaluation for high-density mapping and germplasm characterization. BCM Genomics, 20(1), 331. Full Text.
  • Mosca, E., Cruz, F., Gómez Garrido, J., Bianco, L., Rellstab, C., Brodbeck, S., Csilléry, K., Fady, B., Fladung, M., Fussi, B., Gömöry, D., González-Martínez, S.C., Grivet, D., Gut, M., Hansen, O.K., Heer, K., Kaya, Z., Krutovsky, K.V., Kersten, B., Liepelt, S., Opgenoorth, L., Sperisen, C., Ullrich, K.K., Vendramin, G.G., Westergren, M., Ziegenhagen, B., Alioto, T., Gugerli, F., Heinze, B., Höhn, M., Troggio, M., Neale, D.B. (2019). A reference genome sequence for the European silver fir (Abies alba Mill.): a community-generated genomic resource. G3: Genes, Genomes, Genetics, 9(7): 2039-2049. Full Text.
  • Neale, D. B., & Wheeler, N. C. (2019). The Conifers: Genomes, Variation and Evolution. Cham, Switzerland: Springer.
  • Trouern-Trend, A.J., Falk, T.A., Zaman, Caballero, M., Neale, D.B., Langley, C.H., Dandekar, A., Stevens, K., Wegrzyn, J. (2019). Comparative Genomics of Six Juglans Species Reveals Patterns of Disease-associated Gene Family Contractions. bioRxiv, 561738. Full Text.

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